Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808451.1_cds_XP_016495338.1_9664
CDS Infomation

[gene=LOC107814438] [db_xref=GeneID:107814438] [protein=ABC transporter F family member 5-like] [protein_id=XP_016495338.1] [location=complement(join(11786..11881,12202..12306,12649..12777,12888..12989,13849..14004,14117..14296,14462..14602,14779..15120,16016..16846))] [gbkey=CDS]
Sequence

ATGGACCTTGCTACCACTTTCCTCACGGGCAGAGCCAATCTTCTTTGCCCACGTGTCCTC
TCAATACCGTCTAATACTTCTCTGAAGAACAGCACTTGTACTACTGTTTTCAATAACCCC
AGAAGAAAAAACCTTAGAATTTCATCAAAGTTACAAGCCGTAGCTGTTGAAACTGCTGAA
ACAGAGGTAAAAGATGATATAGAGTCATTATTTTCTAATAATTCAAATGAGGAAATTGAT
TACAGGAGGAGTAACAGGCAAAATACTAGTGGGGCTTCAAGTATTTCATCTGGGGTTAGG
CTAGAAAATGTTAGTAAAAGTTATAAAGGTGTTACTGTATTGAAAGATGTGAGTTGGGAG
GTAAAAAAAGGTGAAAAAGTAGGTTTAGTAGGTGTAAATGGTGCAGGAAAAACAACCCAA
TTGAGGATTATATCTGGTTTAGAGGAACCTGATTCAGGGAATGTGATTAAGGCAAAAAAT
AATATGAAGATTTCATTTTTAAGCCAAGAATTTGAGGTTGAGTCAACAAGAACTGTTAAA
GAAGAGTTTATGAGTGCATTTAAAGAGGAAATGGAAGTTGCTGAGAGACTTGAGAAAGTT
CAGAAGGCAATTGAGAAATCTGTTGATGATTTGGAGTTGATGGGGAGGCTTTTGGATGAG
TTTGATTTGCTGCAAAGGAGAGCACAAGCTGTGGATTTGGATGTTGTGGATGTGAAAATT
AATAAAATGATGCCTGAGTTAGGATTTGCTCCTGAGGATGCTGATAGGCTTGTGGCATCA
TTTAGCAGTGGCTGGCAAATGAGGATGTCTTTAGGGAAGATCTTGCTGCAGGACCCAGAC
TTGTTACTACTGGATGAACCGACCAATCATCTTGACCTTGATACGATTGAGTGGCTTGAG
GGTTATCTTAATAAGCAAGAAGTTCCTATGGTCATTATATCTCATGATCGAGCTTTCCTT
GACCAGTTGTGTACAAAAATTGTGGAGACCGATATGGGTGTATCTAGGACATATGAAGGA
AATTACTCGGATTTTATTATTTCAAGGGCTGAATGGATTGAAACACAGAATGCTGCATGG
GAAAAACAACAGAAGGAAATTGAGCAAACGAGAGGTTTGATAAGTAGGTTAAGTGCCGGA
GCAAACTCAGGTCGTGCATCTACTGCTGAAAAGAAGCTGGAAAAACTTCAGGACCAGGAA
CAAGTTGATAAGCCATTCATTAGGAAACAAATGAAGATTAGGTTCCCTGAACGTGAAAGA
AGTGGAAGAACAGTTGTAAATGTTAAAAATCTGGAATTTGCCTATGAGGATAAGGTCCTT
TTCAAGAATGCAAATTTGACAATTGAGAGAGGAGAGAAAATTGCTATCATTGGTCCTAAT
GGTTGTGGAAAGAGCACTTTTCTTAAACTGATTATGGGTTCACTGAAACCAACACGAGGT
GAAGTTGTGCTTGGGGAGCACAATGTACTACCAAATTACTTTGAGCAGAATCAGGCTGAG
GCACTCGATTTGGAAAAAACTGTTCTTGAAACTGTAGCAGAAGCTGCTGATGACTGGAGA
CTAGATGATATAAAAGGACTCCTTGGACGCTGTAATTTTAAAGCTGACATGCTTGATAGG
AAGGTTTCCTTTTTGAGTGGTGGTGAGAAGGCACGTCTAGCCTTCTGTAAGTTCATGGTG
ACCCCTTCGACTTTGCTTGTACTGGATGAGCCTACCAATCATTTGGATATACCGACAAAA
GAGATGCTTGAGGAGGCTATTACGGAGTATAAAGGCACCGTGATAACTGTTTCGCACGAT
CGGTACTTCATAAAACAGATTGTTAACAGAGTGTTGGAAGTAAAAGATGGCACTTTACAT
GATTATGAAGGAGATTACGATTATTATTTGGAGAAAAACCTTGAAGCAAGGGAAAGAGAG
CTTGAACGCGAGGCAGAGATTGAGGACAAGTCTCCAAAAGCTAAAGCGAAATCCAAGATG
TCAAAGGCGGAAAGGGAAGCTCGGAAAAAACAGAAAATGCTGGCATTCCAAGCAGCAAAA
CAGAAGTCAAAGAAATCAAAGAACTCCAAGAGATGGAACTGA

Peptide Sequence

PEP ID

XP_016495338.1
PEP Infomation

PREDICTED: ABC transporter F family member 5-like [Nicotiana tabacum]
Sequence

MDLATTFLTGRANLLCPRVLSIPSNTSLKNSTCTTVFNNPRRKNLRISSKLQAVAVETAE
TEVKDDIESLFSNNSNEEIDYRRSNRQNTSGASSISSGVRLENVSKSYKGVTVLKDVSWE
VKKGEKVGLVGVNGAGKTTQLRIISGLEEPDSGNVIKAKNNMKISFLSQEFEVESTRTVK
EEFMSAFKEEMEVAERLEKVQKAIEKSVDDLELMGRLLDEFDLLQRRAQAVDLDVVDVKI
NKMMPELGFAPEDADRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLE
GYLNKQEVPMVIISHDRAFLDQLCTKIVETDMGVSRTYEGNYSDFIISRAEWIETQNAAW
EKQQKEIEQTRGLISRLSAGANSGRASTAEKKLEKLQDQEQVDKPFIRKQMKIRFPERER
SGRTVVNVKNLEFAYEDKVLFKNANLTIERGEKIAIIGPNGCGKSTFLKLIMGSLKPTRG
EVVLGEHNVLPNYFEQNQAEALDLEKTVLETVAEAADDWRLDDIKGLLGRCNFKADMLDR
KVSFLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPTKEMLEEAITEYKGTVITVSHD
RYFIKQIVNRVLEVKDGTLHDYEGDYDYYLEKNLEARERELEREAEIEDKSPKAKAKSKM
SKAEREARKKQKMLAFQAAKQKSKKSKNSKRWN

Transcript Sequence

Gene sequence data has not been registered.